The detailed information of tRNA gene sequence


Sequence ID>WENV180070429
Genome IDMPLZ02167147
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1044
End posion on genome 954
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacatcaggt
Secondary structure (Cloverleaf model)
>WENV180070429	Ser	GGA
                   c      GCCA gacatcaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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