The detailed information of tRNA gene sequence


Sequence ID>WENV180070953
Genome IDMPLZ02201746
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1180
End posion on genome 1275
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggcgtccct
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTCGCTCCCTGCTCAGC
AGGGGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
tttcaaccgg
Secondary structure (Cloverleaf model)
>WENV180070953	SeC	TCA
                   t      GCCA tttcaaccgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCTCCCTGCTCAGCAGGGGGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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