The detailed information of tRNA gene sequence


Sequence ID>WENV180071051
Genome IDMPLZ02209923
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 8483
End posion on genome 8577
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacaaaattt
tRNA gene sequence 
GGGGATGATTGCGAGGCTGGTGCCCGTCGCGGTCTTCAAAACCGTTGTCCCGGTGTGAGC
CGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaaacg
Secondary structure (Cloverleaf model)
>WENV180071051	SeC	TCA
                   t      GCCA tttaaaaacg
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | +                 T T
    G       C C G T
      T G C        C     TGTCCCGGTGTGAGCCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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