The detailed information of tRNA gene sequence


Sequence ID>WENV180071193
Genome IDMPLZ02219918
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 15420
End posion on genome 15510
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaaccaac
tRNA gene sequence 
GGAGCGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
gttgattccg
Secondary structure (Cloverleaf model)
>WENV180071193	Ser	GCT
                   c      GCCA gttgattccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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