The detailed information of tRNA gene sequence


Sequence ID>WENV180071223
Genome IDMPLZ02222213
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 706
End posion on genome 782
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttaattat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGCGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
attaaactgt
Secondary structure (Cloverleaf model)
>WENV180071223	fMet	CAT
                   t      ACCA attaaactgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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