The detailed information of tRNA gene sequence


Sequence ID>WENV180071803
Genome IDMPLZ02263138
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1122
End posion on genome 1046
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
caaacaaagg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
cctagtcatc
Secondary structure (Cloverleaf model)
>WENV180071803	Ile2	CAT
                   g      ACCA cctagtcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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