The detailed information of tRNA gene sequence


Sequence ID>WENV180072042
Genome IDMPLZ02278758
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1570
End posion on genome 1496
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cccggtgccg
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTTAGAGCGGCCGGCTCATAACCGGTTGGTCCCTGGTTCGAAT
CCAGGTGGGCCCACCg
Downstream region at tRNA end position 
gacccgtgtg
Secondary structure (Cloverleaf model)
>WENV180072042	Ile2	CAT
                   g      ACCg gacccgtgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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