The detailed information of tRNA gene sequence


Sequence ID>WENV180072083
Genome IDMPMA02000171
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 478
End posion on genome 402
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccatgt
tRNA gene sequence 
GGGAGTGTAGTTCAGTTGGTTAGAACGCTTGCCTGTCACGCAAGAGGTCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
cttaacctgt
Secondary structure (Cloverleaf model)
>WENV180072083	Asp	GTC
                   t      GCCA cttaacctgt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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