The detailed information of tRNA gene sequence


Sequence ID>WENV180072123
Genome IDMPMA02002710
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 926
End posion on genome 1015
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaaaaaac
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCAGGCTTGGAAAGCTTGTGTACTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttatttatc
Secondary structure (Cloverleaf model)
>WENV180072123	Ser	GGA
                   c      GCCA tttatttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTCAAAGGTACC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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