The detailed information of tRNA gene sequence


Sequence ID>WENV180072136
Genome IDMPMA02003178
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4703
End posion on genome 4779
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atccatttgc
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGGGGGTTCGAA
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
cctcaagccc
Secondary structure (Cloverleaf model)
>WENV180072136	fMet	CAT
                   c      ACCA cctcaagccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C G A G       G G G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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