The detailed information of tRNA gene sequence


Sequence ID>WENV180072161
Genome IDMPMA02004399
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 53
End posion on genome 143
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgaatatt
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atacggattt
Secondary structure (Cloverleaf model)
>WENV180072161	Ser	TGA
                   t      GCCA atacggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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