The detailed information of tRNA gene sequence


Sequence ID>WENV180072225
Genome IDMPMA02008788
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 212
End posion on genome 120
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacaagatt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAGTAAGGGTTTAAAAAGC
CCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaaaataga
Secondary structure (Cloverleaf model)
>WENV180072225	Ser	GCT
                   t      GCCA aaaaaataga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGGGTTTAAAAAGCCCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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