The detailed information of tRNA gene sequence


Sequence ID>WENV180072365
Genome IDMPMA02015523
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4623
End posion on genome 4548
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgggcgccgg
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATC
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gtttgtttcg
Secondary structure (Cloverleaf model)
>WENV180072365	Trp	CCA
                   g      GCCA gtttgtttcg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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