The detailed information of tRNA gene sequence


Sequence ID>WENV180072378
Genome IDMPMA02016362
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1483
End posion on genome 1572
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacaggaact
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCACGTGGTTGCTAACTACGCAATGGGGAAACCCAT
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aagctactct
Secondary structure (Cloverleaf model)
>WENV180072378	Ser	GCT
                   t      GCCA aagctactct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAATGGGGAAACCCATTC
                    C - G
                    G - C
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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