The detailed information of tRNA gene sequence


Sequence ID>WENV180072412
Genome IDMPMA02018458
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3762
End posion on genome 3686
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atctgattat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAACCCCCGCAACCA
Downstream region at tRNA end position 
cttttaccga
Secondary structure (Cloverleaf model)
>WENV180072412	fMet	CAT
                   t      ACCA cttttaccga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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