The detailed information of tRNA gene sequence


Sequence ID>WENV180072474
Genome IDMPMA02022869
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1578
End posion on genome 1485
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attataactt
tRNA gene sequence 
GGAAGCGTGGGTGAGTCTGGTTTAAACCAACGGGTTGCTAACTCGTCGTAGAGGGAAACT
TCTACCATCCGTTCAAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
tttcagttga
Secondary structure (Cloverleaf model)
>WENV180072474	Ser	GCT
                   t      GCCA tttcagttga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C T G A        G      | | | | |     A
  T         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    T T T A        A     CGTAGAGGGAAACTTCTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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