The detailed information of tRNA gene sequence


Sequence ID>WENV180072518
Genome IDMPMA02024883
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 641
End posion on genome 737
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcgtgcactc
tRNA gene sequence 
GGAGGTGGGTAGGGCCGGGTGGCTCTCGCGGTCTTCAAAATCGTCGTGGGGCGCTGGTCA
GCGTCCTAGGTGGGTTCGACTCCCATGCACCTCCGCCg
Downstream region at tRNA end position 
ttggtccaga
Secondary structure (Cloverleaf model)
>WENV180072518	SeC	TCA
                   c      GCCg ttggtccaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    G     T A C C C     A
      G C C        T      + | | | |     G
    G       G G G A       G T G G G     C
    G       | + | |                 T T
    T       C T C T
      G G          C     CGTGGGGCGCTGGTCAGCGTCCTAG
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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