The detailed information of tRNA gene sequence


Sequence ID>WENV180072521
Genome IDMPMA02024992
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4065
End posion on genome 3991
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgcgattt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACaa
Downstream region at tRNA end position 
gcaaatcccc
Secondary structure (Cloverleaf model)
>WENV180072521	Met	CAT
                   t      ACaa gcaaatcccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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