The detailed information of tRNA gene sequence


Sequence ID>WENV180072529
Genome IDMPMA02025458
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 275
End posion on genome 351
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttaaatttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
attaagacgc
Secondary structure (Cloverleaf model)
>WENV180072529	fMet	CAT
                   t      ACCA attaagacgc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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