The detailed information of tRNA gene sequence


Sequence ID>WENV180072675
Genome IDMPMA02033940
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 742
End posion on genome 834
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatgacagc
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAAGGGGGGAAACTT
CCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaannnnnnn
Secondary structure (Cloverleaf model)
>WENV180072675	Ser	GCT
                   c      GCCA aaannnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAAGGGGGGAAACTTCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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