The detailed information of tRNA gene sequence


Sequence ID>WENV180072681
Genome IDMPMA02034162
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1092
End posion on genome 1181
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatcaatagc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGCCTTTGCGGGCA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
attcccccgc
Secondary structure (Cloverleaf model)
>WENV180072681	Ser	CGA
                   c      GCCA attcccccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCCTTTGCGGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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