The detailed information of tRNA gene sequence


Sequence ID>WENV180072702
Genome IDMPMA02035370
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2703
End posion on genome 2615
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnttctt
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCGGTCTCGAAAACCGTTGTGCCTTATGGGCAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaccaaat
Secondary structure (Cloverleaf model)
>WENV180072702	Ser	CGA
                   t      GCCA ttaaccaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTGCCTTATGGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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