The detailed information of tRNA gene sequence


Sequence ID>WENV180072705
Genome IDMPMA02035500
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 159
End posion on genome 235
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaattttat
tRNA gene sequence 
CGCGGGCCGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
aaatttaacg
Secondary structure (Cloverleaf model)
>WENV180072705	fMet	CAT
                   t      ACCA aaatttaacg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C   C          T A
                    C     C G A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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