The detailed information of tRNA gene sequence


Sequence ID>WENV180072775
Genome IDMPMA02040602
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1990
End posion on genome 2084
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaaactctt
tRNA gene sequence 
GGAAGGGAATCGGTGTCGGTATGCCGGATAGTCTTCAAAACTATTGGACGCTGTAAGACA
GTGTCAGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
ctttcctttt
Secondary structure (Cloverleaf model)
>WENV180072775	SeC	TCA
                   t      GCCA ctttcctttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C T G        T      | | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      A T          G     TGGACGCTGTAAGACAGTGTCA
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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