The detailed information of tRNA gene sequence


Sequence ID>WENV180072796
Genome IDMPMA02041945
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 291
End posion on genome 202
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagagcagtc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGAATGGGGCGGTCTCGAAAACCGTTGTGGTCGCAAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcaccttgg
Secondary structure (Cloverleaf model)
>WENV180072796	Ser	CGA
                   c      GCCA ttcaccttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTGGTCGCAAGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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