The detailed information of tRNA gene sequence


Sequence ID>WENV180072823
Genome IDMPMA02044661
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4235
End posion on genome 4159
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ccgttcggat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
atttagaaga
Secondary structure (Cloverleaf model)
>WENV180072823	fMet	CAT
                   t      ACCA atttagaaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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