The detailed information of tRNA gene sequence


Sequence ID>WENV180072842
Genome IDMPMA02046177
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 430
End posion on genome 507
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgctcctcgc
tRNA gene sequence 
AGGAGCGTAGCTCAGTCTGGCTAGAGCACTGGTCTCCAAAACCAGCGGTCGGGGGTTCGA
ATCCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
taatattttt
Secondary structure (Cloverleaf model)
>WENV180072842	Trp	CCA
                   c      GCCA taatattttt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     CGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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