The detailed information of tRNA gene sequence


Sequence ID>WENV180072880
Genome IDMPMA02047785
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 7684
End posion on genome 7595
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcattatta
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAGGTGGCAACACCT
TCCAGAGTTCGAATCTCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cactaactaa
Secondary structure (Cloverleaf model)
>WENV180072880	Ser	TGA
                   a      GCCA cactaactaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C T C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAGGTGGCAACACCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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