The detailed information of tRNA gene sequence


Sequence ID>WENV180072888
Genome IDMPMA02048108
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 732
End posion on genome 640
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnncgtt
tRNA gene sequence 
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTACGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position 
taagttatct
Secondary structure (Cloverleaf model)
>WENV180072888	Ser	GCT
                   t      GCCA taagttatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTACGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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