The detailed information of tRNA gene sequence


Sequence ID>WENV180072921
Genome IDMPMA02050115
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1658
End posion on genome 1570
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcagcgtgct
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTAATGCAACGGATTGCTAATCCGTCAACGTGTAACAGCGTTG
CGGGGGTTCGAGTCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
ttcctggcca
Secondary structure (Cloverleaf model)
>WENV180072921	Ser	GCT
                   t      GCCA ttcctggcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C C C C C     A
        G A        G      | | | | |     G
      C     G A C G       G G G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAACGTGTAACAGCGTTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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