The detailed information of tRNA gene sequence


Sequence ID>WENV180072970
Genome IDMPMA02052785
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5393
End posion on genome 5302
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagttcatta
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttagctggtt
Secondary structure (Cloverleaf model)
>WENV180072970	Ser	GCT
                   a      GCCA ttagctggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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