The detailed information of tRNA gene sequence


Sequence ID>WENV180073085
Genome IDMPMA02060136
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1148
End posion on genome 1059
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacaccgtc
tRNA gene sequence 
GGTGGGGTGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGCCCTCGCGGGTA
CCGTGGGTTCGAATCCCACCCCCACCGCCA
Downstream region at tRNA end position 
tttatcaaat
Secondary structure (Cloverleaf model)
>WENV180073085	Ser	CGA
                   c      GCCA tttatcaaat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGCCCTCGCGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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