The detailed information of tRNA gene sequence


Sequence ID>WENV180073102
Genome IDMPMA02061331
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 6160
End posion on genome 6083
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcccagtgt
tRNA gene sequence 
GGGGTCGTAGTTGAGTTTGGTTACAACACTGGCCTGTCACGCCAGAGGCCGCGGGTTCGA
GCCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
ctccaaagag
Secondary structure (Cloverleaf model)
>WENV180073102	Asp	GTC
                   t      GCCA ctccaaagag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          C G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         G T T G       G C G G G     C
  G         | | | |                 T T
  G         C A A C
    T T A          A     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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