The detailed information of tRNA gene sequence


Sequence ID>WENV180073223
Genome IDMPMA02067965
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 564
End posion on genome 655
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atggtcaccc
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACGATCGGGGCCGCCTGCTAAGTGGTTGTCGGGGTAAAACTC
GACCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
gtcctcaata
Secondary structure (Cloverleaf model)
>WENV180073223	Ser	GCT
                   c      GCCA gtcctcaata
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTCGGGGTAAAACTCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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