The detailed information of tRNA gene sequence


Sequence ID>WENV180073264
Genome IDMPMA02070602
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1255
End posion on genome 1166
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcactttac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tattcctata
Secondary structure (Cloverleaf model)
>WENV180073264	Ser	GGA
                   c      GCCA tattcctata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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