The detailed information of tRNA gene sequence


Sequence ID>WENV180073407
Genome IDMPMA02079180
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 109
End posion on genome 33
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
attttaaaat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGCGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
aattttatat
Secondary structure (Cloverleaf model)
>WENV180073407	fMet	CAT
                   t      ACCA aattttatat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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