The detailed information of tRNA gene sequence


Sequence ID>WENV180073426
Genome IDMPMA02080254
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2155
End posion on genome 2079
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cacctacaga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
attttttggt
Secondary structure (Cloverleaf model)
>WENV180073426	fMet	CAT
                   a      ACCA attttttggt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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