The detailed information of tRNA gene sequence


Sequence ID>WENV180073484
Genome IDMPMA02083981
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 416
End posion on genome 340
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cccttgtaat
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGACGGGCTCATAACCCGTAGGTCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
aagattttga
Secondary structure (Cloverleaf model)
>WENV180073484	fMet	CAT
                   t      ACCA aagattttga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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