The detailed information of tRNA gene sequence


Sequence ID>WENV180073490
Genome IDMPMA02084343
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1406
End posion on genome 1317
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaattatca
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTTTAAGGCGCGCGCTTGGAAAGCGTGTATTCTGAGAAATTGG
AATCGAGGGTTCGAATCCCTTCCTCTCTGCta
Downstream region at tRNA end position 
agttgttttt
Secondary structure (Cloverleaf model)
>WENV180073490	Ser	GGA
                   a      GCta agttgttttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTCTGAGAAATTGGAATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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