The detailed information of tRNA gene sequence


Sequence ID>WENV180073914
Genome IDMPMA02109090
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 794
End posion on genome 703
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagatcattt
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tctattatta
Secondary structure (Cloverleaf model)
>WENV180073914	Ser	GCT
                   t      GCCA tctattatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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