The detailed information of tRNA gene sequence


Sequence ID>WENV180073984
Genome IDMPMA02113352
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1220
End posion on genome 1296
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tcacattcat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
aaatagattc
Secondary structure (Cloverleaf model)
>WENV180073984	fMet	CAT
                   t      ACCA aaatagattc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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