The detailed information of tRNA gene sequence


Sequence ID>WENV180074027
Genome IDMPMA02115811
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5284
End posion on genome 5207
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttgaccagt
tRNA gene sequence 
AGCGGGGTGGGGTAGCTAGGAAATCCCGTCGGGCTCATAACCCGGAGATCGATGGTTCAA
ATCCATCCCCCGCTACCA
Downstream region at tRNA end position 
ttattattaa
Secondary structure (Cloverleaf model)
>WENV180074027	fMet	CAT
                   t      ACCA ttattattaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    T C G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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