The detailed information of tRNA gene sequence


Sequence ID>WENV180074170
Genome IDMPMA02124973
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 169
End posion on genome 77
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagtgatgct
tRNA gene sequence 
GGAGAGGTTGCCGAGTGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTTAACCGCA
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttattat
Secondary structure (Cloverleaf model)
>WENV180074170	Ser	CGA
                   t      GCCA tttttattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTTAACCGCAGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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