The detailed information of tRNA gene sequence


Sequence ID>WENV180074192
Genome IDMPMA02126871
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 538
End posion on genome 627
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggccgccac
tRNA gene sequence 
GGAGAGTTGGGTGAGTCAGGTTTATACCAGCACATTGCTAATGTGCCGCACTTTTGGGTG
CCGTAGGTTCAAATCCTACACTCTCCGCCA
Downstream region at tRNA end position 
tatagggcag
Secondary structure (Cloverleaf model)
>WENV180074192	Ser	GCT
                   c      GCCA tatagggcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A T C C     A
    C T G A        G      | | | | |     A
  A         G T G G       G T A G G     C
  G         + | | |                 T T
  G         T A C C
    T T T A        A     CGCACTTTTGGGTGCC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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