The detailed information of tRNA gene sequence


Sequence ID>WENV180074242
Genome IDMPMA02130161
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1018
End posion on genome 931
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taccaatcac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAACCTCGCGGTTCC
CAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttctcagata
Secondary structure (Cloverleaf model)
>WENV180074242	Ser	TGA
                   c      GCCA ttctcagata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACCTCGCGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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