The detailed information of tRNA gene sequence


Sequence ID>WENV180074337
Genome IDMPMA02137709
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5387
End posion on genome 5477
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgcaagcag
tRNA gene sequence 
GGAGGGATCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTAACCTGTGAAAGCGG
GTTCATGGGTTCGAATCCCATTCCCTCCGCCg
Downstream region at tRNA end position 
tctcttgtac
Secondary structure (Cloverleaf model)
>WENV180074337	Ser	GCT
                   g      GCCg tctcttgtac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAACCTGTGAAAGCGGGTTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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