The detailed information of tRNA gene sequence


Sequence ID>WENV180074538
Genome IDMPMA02150469
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 582
End posion on genome 658
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cccttgttgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGATGGGCTCATAACCCATAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
caatttgaga
Secondary structure (Cloverleaf model)
>WENV180074538	fMet	CAT
                   t      ACCA caatttgaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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