The detailed information of tRNA gene sequence


Sequence ID>WENV180074611
Genome IDMPMA02154118
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3459
End posion on genome 3548
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcccaatcc
tRNA gene sequence 
GGAAAGGTGACCGAGTGGCCGAAGGTGCGTGACTGGAAATCACGTGTGCGGGCAACCGCA
CCGGGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
gcacaccgtt
Secondary structure (Cloverleaf model)
>WENV180074611	Ser	GGA
                   c      GCCA gcacaccgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGCACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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