The detailed information of tRNA gene sequence


Sequence ID>WENV180074628
Genome IDMPMA02155953
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 469
End posion on genome 562
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagttggatt
tRNA gene sequence 
GGAAGCGTGGGTGAGCCTGGCTTAAACCAACAGTTTGCTAAATTGTCATAGGATTAACTT
TCTATCATCCGTTCGAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
gaaactaatt
Secondary structure (Cloverleaf model)
>WENV180074628	Ser	GCT
                   t      GCCA gaaactaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C C G A        G      | | | | |     G
  T         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    C T T A        A     CATAGGATTAACTTTCTATC
                    A - T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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