The detailed information of tRNA gene sequence


Sequence ID>WENV180074687
Genome IDMPMA02160420
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 987
End posion on genome 897
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgatgtgttg
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAGGCGCCGGTCTCGAAAACCGGTATATGCATTCCGCAT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
aacataattt
Secondary structure (Cloverleaf model)
>WENV180074687	Ser	CGA
                   g      GCCA aacataattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TATATGCATTCCGCATATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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